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There is a great DIY for bucking, hesitation and erratic idle on here. Use the search button, it will come up. I say its the IACV, TPS, or MAF sensor, or a combo of the three. Also try cleaning your throttle body with some great cleaner and a wire tooth brush.
also if you removed the distributor make sure your timing is right with the light, easiest way to make a 2jz sound like a boat is to be 1 tooth off in the direction that retards the timing.
I dont get what you mean by hand over the intake, you mean the filter?
i have a short ram and took of the cone and it started to build on rpm and didnt give me any more problems and i started it 2 hours ago in 55 degree weather and she idled better???