Last week my car was broke down due to the alternator, changed the alternator and accidentally short the circuit. Replaced the fusible link, car starts fine but that leads to another problem.

All 4 windows doesn’t work

P/S light on

Battery light on

Brake light always on

ABS lights on

ATS Lights on

Speedo don’t work etc

I have checked all the fuses in all 4 fuse box and all looks fine. Reset the ECU with pulling out the fuse and also disconnected the battery, try read a faulty code with a code reader and it doesn’t gives me any. I wonder if anyone can shed some lights on this ?
Vehicle is 2006 IS250 2nd Gen

I would also like to thanks for the guide on the forum, it makes life so much easier.